Package: CONCUR 1.5
CONCUR: Copy Number Profile Curve-Based Association Test
Implements a kernel-based association test for copy number variation (CNV) aggregate analysis in a certain genomic region (e.g., gene set, chromosome, or genome) that is robust to the within-locus and across-locus etiological heterogeneity, and bypass the need to define a "locus" unit for CNVs. Brucker, A., et al. (2020) <doi:10.1101/666875>.
Authors:
CONCUR_1.5.tar.gz
CONCUR_1.5.zip(r-4.7-any)CONCUR_1.5.zip(r-4.6-any)CONCUR_1.5.zip(r-4.5-any)
CONCUR_1.5.tgz(r-4.6-any)CONCUR_1.5.tgz(r-4.5-any)
CONCUR_1.5.tar.gz(r-4.7-any)CONCUR_1.5.tar.gz(r-4.6-any)
CONCUR_1.5.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
CONCUR/json (API)
| # Install 'CONCUR' in R: |
| install.packages('CONCUR', repos = c('https://sth1402.r-universe.dev', 'https://cloud.r-project.org')) |
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated from:17738d3ec6. Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel | OK | 123 | ||
| source / vignettes | OK | 144 | ||
| linux-release | OK | 110 | ||
| macos-release | OK | 104 | ||
| macos-oldrel | OK | 164 | ||
| windows-devel | OK | 90 | ||
| windows-release | OK | 85 | ||
| windows-oldrel | OK | 84 | ||
| wasm-release | OK | 80 |
Exports:concur
Dependencies:cliCompQuadFormdplyrgenericsgluelatticelifecyclemagrittrMatrixmgcvnlmepillarpkgconfigR6rlangtibbletidyselectutf8vctrswithr
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Pseudo Copy Number Variants Data | cnvData |
| Copy Number Profile Curve-Based Association Test | concur |
| Pseudo Covariate Data | covData |
| Pseudo Phenotype Data | phenoData |