Package: CONCUR 1.4
CONCUR: Copy Number Profile Curve-Based Association Test
Implements a kernel-based association test for copy number variation (CNV) aggregate analysis in a certain genomic region (e.g., gene set, chromosome, or genome) that is robust to the within-locus and across-locus etiological heterogeneity, and bypass the need to define a "locus" unit for CNVs. Brucker, A., et al. (2020) <doi:10.1101/666875>.
Authors:
CONCUR_1.4.tar.gz
CONCUR_1.4.zip(r-4.5)CONCUR_1.4.zip(r-4.4)CONCUR_1.4.zip(r-4.3)
CONCUR_1.4.tgz(r-4.5-any)CONCUR_1.4.tgz(r-4.4-any)CONCUR_1.4.tgz(r-4.3-any)
CONCUR_1.4.tar.gz(r-4.5-noble)CONCUR_1.4.tar.gz(r-4.4-noble)
CONCUR_1.4.tgz(r-4.4-emscripten)CONCUR_1.4.tgz(r-4.3-emscripten)
CONCUR.pdf |CONCUR.html✨
CONCUR/json (API)
| # Install 'CONCUR' in R: |
| install.packages('CONCUR', repos = c('https://sth1402.r-universe.dev', 'https://cloud.r-project.org')) |
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 3 years agofrom:22d9690e4d. Checks:8 OK. Indexed: yes.
| Target | Result | Latest binary |
|---|---|---|
| Doc / Vignettes | OK | Jan 27 2025 |
| R-4.5-win | OK | Jan 27 2025 |
| R-4.5-mac | OK | Jan 27 2025 |
| R-4.5-linux | OK | Jan 27 2025 |
| R-4.4-win | OK | Jan 27 2025 |
| R-4.4-mac | OK | Jan 27 2025 |
| R-4.3-win | OK | Jan 27 2025 |
| R-4.3-mac | OK | Jan 27 2025 |
Exports:concur
Dependencies:cliCompQuadFormdplyrfansigenericsgluelatticelifecyclemagrittrMatrixmgcvnlmepillarpkgconfigR6rlangtibbletidyselectutf8vctrswithr
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Pseudo Copy Number Variants Data | cnvData |
| Copy Number Profile Curve-Based Association Test | concur |
| Pseudo Covariate Data | covData |
| Pseudo Phenotype Data | phenoData |
