iDOVE: Durability of Vaccine Efficacy Against SARS-CoV-2 Infection

Package: iDOVE 1.5

iDOVE: Durability of Vaccine Efficacy Against SARS-CoV-2 Infection

Implements a nonparametric maximum likelihood method for assessing potentially time-varying vaccine efficacy (VE) against SARS-CoV-2 infection under staggered enrollment and time-varying community transmission, allowing crossover of placebo volunteers to the vaccine arm. Lin, D. Y., Gu, Y., Zeng, D., Janes, H. E., and Gilbert, P. B. (2021) <doi:10.1093/cid/ciab630>.

Authors:Yu Gu [aut], Shannon T. Holloway [aut, cre], Dan-Yu Lin [aut]

iDOVE_1.5.tar.gz
iDOVE_1.5.zip(r-4.7)iDOVE_1.5.zip(r-4.6)iDOVE_1.5.zip(r-4.5)
iDOVE_1.5.tgz(r-4.6-x86_64)iDOVE_1.5.tgz(r-4.6-arm64)iDOVE_1.5.tgz(r-4.5-x86_64)iDOVE_1.5.tgz(r-4.5-arm64)
iDOVE_1.5.tar.gz(r-4.7-arm64)iDOVE_1.5.tar.gz(r-4.7-x86_64)iDOVE_1.5.tar.gz(r-4.6-arm64)iDOVE_1.5.tar.gz(r-4.6-x86_64)
iDOVE_1.5.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
iDOVE/json (API)

# Install 'iDOVE' in R:

install.packages('iDOVE', repos = c('https://sth1402.r-universe.dev', 'https://cloud.r-project.org'))

Uses libs:

openblas– Optimized BLAS
c++– GNU Standard C++ Library v3
openmp– GCC OpenMP (GOMP) support library

Datasets:

idoveData - Toy Dataset For Illustration

On CRAN:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

openblas cpp openmp

2.00 score 273 downloads 1 mentions 2 exports 2 dependencies

Last updated from:eb9ad765ac. Checks:11 WARNING, 2 OK. Indexed: yes.

Target	Result	Time
linux-devel-arm64	WARNING	159
linux-devel-x86_64	WARNING	138
source / vignettes	OK	215
linux-release-arm64	WARNING	136
linux-release-x86_64	WARNING	138
macos-release-arm64	WARNING	130
macos-release-x86_64	WARNING	248
macos-oldrel-arm64	WARNING	90
macos-oldrel-x86_64	WARNING	272
windows-devel	WARNING	155
windows-release	WARNING	128
windows-oldrel	WARNING	162
wasm-release	OK	154

Exports:idove intCens

Dependencies:Rcpp RcppArmadillo

iDOVE -- $\text{\underline{D}}$urability $\text{\underline{O}}$f $\text{\underline{V}}$accine $\text{\underline{E}}$fficacy Against SARS-CoV-2 $\text{\underline{I}}$nfection

Rendered fromiDOVE_vignette.Rmdusingknitr::rmarkdown

Help page	Topics
Durability of Vaccine Efficacy Against Asymptomatic SARS-CoV-2 Infection	idove
Toy Dataset For Illustration	idoveData
Specify Time Variables	intCens
Plot Estimated Vaccine Efficacy	plot plot.iDOVE
Print the Primary Results of an idove() Analysis	print print.iDOVE

Help page

Topics

Durability of Vaccine Efficacy Against Asymptomatic SARS-CoV-2 Infection

idove

Toy Dataset For Illustration

idoveData

Specify Time Variables

intCens

Plot Estimated Vaccine Efficacy

plot plot.iDOVE

Print the Primary Results of an idove() Analysis

print print.iDOVE