Package: CONCUR
Type: Package
Title: Copy Number Profile Curve-Based Association Test
Version: 1.5
Date: 2025-05-03
Author: Amanda Brucker [aut], Shannon T. Holloway [aut, cre], Jung-Ying
        Tzeng [aut]
Authors@R: c(person(given = "Amanda",
                        family = "Brucker",
                        role = "aut"),
                 person(given = c("Shannon", "T."),
                        family = "Holloway",
                        role = c("aut", "cre"),
                        email = "shannon.t.holloway@gmail.com"),
                 person(given = "Jung-Ying",
                        family = "Tzeng",
                        role = "aut"))
Maintainer: Shannon T. Holloway <shannon.t.holloway@gmail.com>
Description: Implements a kernel-based association test for copy number
        variation (CNV) aggregate analysis in a certain genomic region
        (e.g., gene set, chromosome, or genome) that is robust to the
        within-locus and across-locus etiological heterogeneity, and
        bypass the need to define a "locus" unit for CNVs. Brucker, A.,
        et al. (2020) <doi:10.1101/666875>.
License: GPL-2
NeedsCompilation: no
Encoding: UTF-8
Depends: CompQuadForm, dplyr, mgcv
RoxygenNote: 7.1.0
Collate: 'commonAUC.R' 'segLength.R' 'popFunc.R' 'uniqueCombinations.R'
        'createDF.R' 'deldup.R' 'CAUCkernel.R' 'cnvData.R' 'compFunc.R'
        'dataChecks.R' 'test.qt.R' 'test.bt.R' 'pv_func.R' 'concur.R'
Packaged: 2026-07-04 06:25:33 UTC; root
Repository: https://sth1402.r-universe.dev
Date/Publication: 2025-05-03 18:40:02 UTC
RemoteUrl: https://github.com/cran/CONCUR
RemoteRef: HEAD
RemoteSha: 17738d3ec6dad7e2ebbd101293085fca57249bd9